The current results illustrate the complexity of apoptosis regulation in epithelial cells in response to H. pylori exposure, and the cluster analysis suggests that there is some

biological coordination Screening Library cell line of gene expression regulating apoptosis. This may explain some of the complex carcinogenic mechanism of H. pylori in gastric adenocarcinoma. There is strong association between H. pylori infecton, in particular the cagA + genotype [44], and gastric adenocarcinoma [45, 46], and also other cancers have been suggested to harbour a role for H. pylori [47, 48]. Furthermore, the present study shows that several cancer-related KEGG pathways are impacted in AGS cells during 24 h of cagA + H. pylori infection, in particular pathways in cancer, bladder cancer, prostate cancer, small cell lung cancer and the MAPK pathway. Several individual oncogenes and cancer related genes were also increased during, and at the end of the study, including ANGPT2, CEBPB, ECGF1, MMP7, MMP10, JUN, FOSB, EGFR, CTNNB1, ANXA1,

CD55, CLDN1, KLK6, KRT7, LCN2, MYC, PIM1, PIM2, PIM3 and ATF3. IL-8 appears BGB324 manufacturer CHIR98014 solubility dmso paramount in the acute inflammatory response to H. pylori infection, as this gene is involved in all significant response pathways in the initial cellular response to infection. Several authors have demonstrated increase in IL-8 in response to H. pylori in both in vivo [49] and in vitro [50, 51] studies. IL-8 is a key chemokine in accumulating neutrophils. Gastric mucosal IL-8 levels have shown a positive correlation with the degree of stomach corpus inflammation [52], and IL-8 is also highly increased in gastric cancer [53, 54]. Our findings are supported by other authors who have demonstrated that IL-8 mRNA in vitro peaks between 2 and 4 h before decreasing over the next hours under similar conditions

[55, 56]. oxyclozanide Protein studies have shown steady state IL-8 levels after 3 h [50, 57, 58], which is also in harmony with our ELISA results, where marked IL-8 levels were detectable at 3 h and continuing to increase at 6 h before reaching a steady level. H. pylori-induced IL-8 secretion may be explained by both stimulation of the MAPK signaling system [59, 60], and NF-κB activation through several pathways [61, 62]. In the present study, MAPK signaling was ranked relatively high from 3 h onwards, based on IF calculations, and the cluster analysis showed that increasingly more genes in the MAPK pathway were affected after 6 h of H. pylori exposure. Regulators of NF-κB; TNFAIP3, RELB and BIRC3, which could also have explained the IL-8 expression, show increasing expression after 3 h (Additional file 1: Table S1), identical to the findings of Guillemin et al. [29].