Subfamily and tentative subfamily groupings are indicated in the grey and dotted boxes, respectively. A. Myoviridae www.selleckchem.com/HDAC.html Subfamilies I. Teequatrovirinae 1. T4-like viruses nova comb The ICTV currently lists only six sequenced viruses as members of the T4 phage genus, namely enterobacterial phage T4, Acinetobacter phage 133, Aeromonas phages Aeh1, 65 and 44RR2.8t, and Vibrio phage nt-1. However, the scientific literature and public databases abound with descriptions of “”T4-like”" phages and

the analysis of complete genome sequences indicates that the T4-related phages constitute one of the largest groups of bacterial viruses. This corroborates ecogenomic studies on the diversity of these viruses as apparent in the heterogeneity of capsid (gp23) genes in isolates from Japanese rice fields [4], marine systems [5, 6], and from Lithuania [7], Bangladesh and Switzerland [8]. These studies suggest that the fully sequenced T4 phages are but a small fraction of the T4-related

genomes in nature. Nevertheless, there are clear commonalities among all sequenced “”T4-like”" genomes from different host groups, including the cyanophages, namely a set of 33-35 genes that have persisted during the evolution of genomes with sizes from 160 to 250 kb [9]. This core of genes seems to have resisted divergence throughout evolution. Nevertheless, these horizontal substitutions HSP990 do not erase the evidence of the global relationship between phages and clear hybrid phages within this group have not been identified to date [10, 11]. Work done at Tulane University [10, 11], led to the tentative conclusion that it takes about 33 T4 genes to determine

a genetic program that controls lytic phage development in the host cell. Based on the Myoviridae cluster dendrogram (Figure 1), the current ICTV genus “”T4-like viruses”" can be subdivided into two genera and several NU7026 price subgroups. By analogy to the T7-related podoviruses, now named the Autographivirinae, the former ICTV genus was raised to the rank of a subfamily, the Teequatrovirinae, named after the best-studied of these phages, coliphage T4. The first genus, the “”T4-like viruses”", includes what were previously termed the T-even and “”pseudo-T-even”" phages [12, 13]. Our name perpetuates the old ICTV nomenclature, but is now limited to enterobacterial and Aeromonas Tenoxicam phages. The KVP40 phages, consisting of two former members of the “”schizo-T-evens”" [14] form the other genus. The “”T4-like viruses”" are morphologically indistinguishable and have moderately elongated heads of about 110 nm in length, 114 nm long tails with a collar, base plates with short spikes, and six long kinked tail fibers. Within this assemblage, we identified four distinct subtypes with >70% protein similarity. These are the T4-type phages (phages T4, JS10, JS98, RB14, RB32, RB51, RB69), 44RR-type (phages 44RR2.8t, 31, 25), RB43-type (RB43, RB16), and the RB49-type viruses (RB49, JSE, φ1).